Testing hominoid phylogeny with the PHYLIP programs - Elsevier
Keywords: PHYLIP; cladistic analysis; parsimony; hominoid phylogeny ... The analyses reported here were carried out using Felsenstein's PHYLIP programs. ...
linkinghub.elsevier.com/retrieve/pii/0047248491900...
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DrawGram-Phylip
Written by Joseph Felsenstein. Permission is granted to copy this document provided that no fee is charged for it and that this copyright notice is not ...
www.hku.hk/bruhk/phylip/drawgram.html
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Phylip
Phylip : dnadist - Compute distance matrix from nucleotide ... Felsenstein, J. 1989. PHYLIP -- Phylogeny Inference Package (Version 3.2). Cladistics 5: 164-166. ...
gene3.ciat.cgiar.org/Pise/5.a/dnadist.html
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HIV Sequence Database: PHYLIP Copyright/Reference Info
Felsenstein, J. 1993. PHYLIP (Phylogeny Inference Package) version 3.5c. ... you could cite a notice for version 3.2 published in Cladistics: Felsenstein ...
hcv.lanl.gov/content/sequence/TREEMAKER/JoeCredit....
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REFERENCES FOR THE DOCUMENTATION FILES
PHYLIP: Phylogeny Inference Package. Version 3.2. (Software review). .... Felsenstein, J. 1986. Distance methods: a reply to Farris. Cladistics 2: 130-144 . ...
cmgm.stanford.edu/phylip/ref.html
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Phylip
Felsenstein, J. 1993. PHYLIP (Phylogeny Inference Package) ... Felsenstein, J. 1989. PHYLIP -- Phylogeny Inference Package (Version 3.2). Cladistics 5: 164-166. ...
evol.mcmaster.ca/Pise/5.a/kitsch-simple.html
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Phylip
Phylip : fitch - Fitch-Margoliash and Least-Squares ... Felsenstein, J. 1989. PHYLIP -- Phylogeny Inference Package (Version 3.2). Cladistics 5: 164-166. ...
evol.mcmaster.ca/Pise/5.a/fitch-simple.html
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Gaphyl: A Genetic Algorithm Approach to Cladistics
To hasten the development of our system, we used parts of two existing software packages. Phylip. Felsenstein] is a cladistics system widely used by bi- ...
citeseerx.ist.psu.edu/viewdoc/download?doi=10.1.1....
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http://www.cs.colby.edu/~congdon/Publications/GaphylPoster.ppt
Online at http://phylogeny.harvard.edu/treebase; J. Felsenstein. Phylip ... Phylip is a commonly used cladistics package, with freely available source code. ...
www.cs.colby.edu/~congdon/Publications/GaphylPoste...
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Phylip
Phylip : mix - Mixed method parsimony (Felsenstein) your e-mail ... Felsenstein, J. 1989. PHYLIP -- Phylogeny Inference Package (Version 3.2). Cladistics 5: 164-166. ...
bioportal.cgb.indiana.edu/pise/mix.html
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Phylip
Feb 20, 2009 ... Felsenstein, J. 1993. PHYLIP (Phylogeny Inference Package) version 3.5c. Distributed by the author. ... Cladistics 5: 164-166. ...
bioportal.cgb.indiana.edu/pise/dnadist.html
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SSB - Cladistic Literature (D-F)
Advances in Cladistics proceedings of the Second meeting of the Willi Hennig .... Felsenstein, J. 1991. PHYLIP (Phylogeny Inference Package), Version 3.4. ...
systbiol.org/cladlitd-f.html
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Inferring Geographic Isolation of Wolverines in California ...
3.63; Felsenstein 1989) and drew them using program. TREEVIEW (version 1.6.6; Page 1996) ... Felsenstein, J. 1989. PHYLIP. Cladistics 5:164166. ...
www.rmrs.nau.edu/publications/schwartzancientwolve...
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main.html
PHYLIP (Phylogeny Inference Package) Version 3.5c. by Joseph Felsenstein. March, 1993 ... Getting PHYLIP onto your microcomputer. Microsoft Quick C and ...
www.psc.edu/general/software/packages/phylip/manua...
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Cladistic analysis of continuous modularized traits provides ...
Cladistics (in the press); Felsenstein, J. Inferring Phylogenies (Sinauer Associates, Sunderland, Massachusetts, 2004); Felsenstein, J. PHYLIP (Phylogeny ...
www.nature.com/nature/journal/v453/n7196/full/natu...
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Complex Determinants in Human Immunodeficiency Virus Type 1 Envelope
Phylogenetic analysis was performed by using neighbor-joining and maximum parsimony in the PHYLIP software package (17, 46). Bootstrap values were based on generation of 100 replicate trees...
jvi.asm.org/cgi/content/full/79/21/13250
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CLADISTIC AND BIOGEOGRAPHIC ANALYSES OF HAWAIIAN PIPUNCULIDAE ...
However, the cladistic analysis was then carried out with the PHYLIP software package. (Felsenstein, 1986) version 2.9, which generated only a single most ...
doi.wiley.com/10.1111/j.1096-0031.1996.tb00016.x
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Journal of Clinical Investigation -- Differential coreceptor
Phylogenetic analyses were produced using the neighbor joining method (NEIGHBOR) as implemented in the Phylip package (version 3.5c) (56). Endgaps were excluded from analyses, leaving 348 n...
www.jci.org/cgi/content/full/106/8/1039
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Main Documentation-Phylip
PHYLIP (Phylogeny Inference Package) Version 3.57c by Joseph Felsenstein July, ... cite a notice for version 3.2 published in Cladistics: Felsenstein, J. 1989. ...
www.hku.hk/bruhk/phylip/main12.html
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se360001724p
at 3 km. The d18O record for G. ruber is very similar to the previously published record for 806B, as well as other piston cores from the OJP, ... To probe early evolutionary history of...
www.sou.edu/biology/Courses/Bi332/Xiong.pdf
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